MRC2 Publications

Author Title [ Type(Desc)] Year
Journal Article
Piert M, Montgomery J, Kunju LPriya, Siddiqui J, Rogers V, Rajendiran T, Johnson TD, Shao X, Davenport MS.  2016.  18F-Choline PET/MRI: The Additional Value of PET for MRI-Guided Transrectal Prostate Biopsies.. J Nucl Med.
Obi AT, Stringer KA, Diaz JA, Finkel MA, Farris DM, Yeomans L, Wakefield T, Myers DD.  2016.  1D-¹H-nuclear magnetic resonance metabolomics reveals age-related changes in metabolites associated with experimental venous thrombosis.. J Vasc Surg Venous Lymphat Disord. 4(2):221-30.
Lee J, Ellis JM, Wolfgang MJ.  2015.  Adipose fatty acid oxidation is required for thermogenesis and potentiates oxidative stress-induced inflammation.. Cell Rep. 10(2):266-79.
Parlee SD, Simon BR, Scheller EL, Alejandro EU, Learman BS, Krishnan V, Bernal-Mizrachi E, MacDougald OA.  2014.  Administration of saccharin to neonatal mice influences body composition of adult males and reduces body weight of females.. Endocrinology. 155(4):1313-26.
Turcu AF, Nanba AT, Chomic R, Upadhyay SK, Giordano TJ, Shields JJ, Merke DP, Rainey WE, Auchus RJ.  2016.  Adrenal-derived 11-oxygenated 19-carbon steroids are the dominant androgens in classic 21-hydroxylase deficiency.. Eur J Endocrinol. 174(5):601-9.
Bassis CM, Theriot CM, Young VB.  2014.  Alteration of the murine gastrointestinal microbiota by tigecycline leads to increased susceptibility to Clostridium difficile infection.. Antimicrob Agents Chemother. 58(5):2767-74.
Demehri FR, Frykman PK, Cheng Z, Ruan C, Wester T, Nordenskjöld A, Kawaguchi A, Hui TT, Granström AL, Funari V et al..  2016.  Altered fecal short chain fatty acid composition in children with a history of Hirschsprung-associated enterocolitis.. J Pediatr Surg. 51(1):81-6.
Mathew AV, E Seymour M, Byun J, Pennathur S, Hummel SL.  2015.  Altered Metabolic Profile With Sodium-Restricted Dietary Approaches to Stop Hypertension Diet in Hypertensive Heart Failure With Preserved Ejection Fraction.. J Card Fail. 21(12):963-7.
Saito Y, Chapple RH, Lin A, Kitano A, Nakada D.  2015.  AMPK Protects Leukemia-Initiating Cells in Myeloid Leukemias from Metabolic Stress in the Bone Marrow.. Cell Stem Cell. 17(5):585-96.
Theriot CM, Koenigsknecht MJ, Carlson PE, Hatton GE, Nelson AM, Li B, Huffnagle GB, Li JZ, Young VB.  2014.  Antibiotic-induced shifts in the mouse gut microbiome and metabolome increase susceptibility to Clostridium difficile infection.. Nat Commun. 5:3114.
Simon BR, Parlee SD, Learman BS, Mori H, Scheller EL, Cawthorn WP, Ning X, Gallagher K, Tyrberg B, Assadi-Porter FM et al..  2013.  Artificial sweeteners stimulate adipogenesis and suppress lipolysis independently of sweet taste receptors.. J Biol Chem. 288(45):32475-89.
Evans SJ, Kamali M, Prossin AR, Harrington GJ, Ellingrod VL, McInnis MG, Burant CF.  2012.  Association of plasma ω-3 and ω-6 lipids with burden of disease measures in bipolar subjects.. J Psychiatr Res. 46(11):1435-41.
Okamura DM, Pennathur S.  2015.  The balance of powers: Redox regulation of fibrogenic pathways in kidney injury.. Redox Biol. 6:495-504.
Noori S, McNamara P, Jain A, Lavoie PM, Wickremasinghe A, Merritt TA, Solomon T, Sekar K, Attridge JT, Swanson JR et al..  2015.  Catecholamine-resistant hypotension and myocardial performance following patent ductus arteriosus ligation.. J Perinatol. 35(2):123-7.
Reed S, Neuman H, Moscovich S, Glahn RP, Koren O, Tako E.  2015.  Chronic Zinc Deficiency Alters Chick Gut Microbiota Composition and Function.. Nutrients. 7(12):9768-84.
Wardlaw SL, Burant CF, Klein S, Meece K, White A, Kasten T, Lucey BP, Bateman RJ.  2014.  Continuous 24-hour leptin, proopiomelanocortin, and amino acid measurements in human cerebrospinal fluid: correlations with plasma leptin, soluble leptin receptor, and amino acid levels.. J Clin Endocrinol Metab. 99(7):2540-8.
Taylor LK, Auchus RJ, Baskin LS, Miller WL.  2013.  Cortisol response to operative stress with anesthesia in healthy children.. J Clin Endocrinol Metab. 98(9):3687-93.
Scher JU, Ubeda C, Artacho A, Attur M, Isaac S, Reddy SM, Marmon S, Neimann A, Brusca S, Patel T et al..  2015.  Decreased bacterial diversity characterizes the altered gut microbiota in patients with psoriatic arthritis, resembling dysbiosis in inflammatory bowel disease.. Arthritis Rheumatol. 67(1):128-39.
Hinder LM, Vivekanandan-Giri A, McLean LL, Pennathur S, Feldman EL.  2013.  Decreased glycolytic and tricarboxylic acid cycle intermediates coincide with peripheral nervous system oxidative stress in a murine model of type 2 diabetes.. J Endocrinol. 216(1):1-11.
B Salloum A, Veiga-Lopez A, Abbott DH, Burant CF, Padmanabhan V.  2015.  Developmental programming: exposure to testosterone excess disrupts steroidal and metabolic environment in pregnant sheep.. Endocrinology. 156(6):2323-37.
Tsou C-C, Avtonomov D, Larsen B, Tucholska M, Choi H, Gingras A-C, Nesvizhskii AI.  2015.  DIA-Umpire: comprehensive computational framework for data-independent acquisition proteomics.. Nat Methods. 12(3):258-64,7pfollowing264.
Zarrinpar A, Chaix A, Yooseph S, Panda S.  2014.  Diet and feeding pattern affect the diurnal dynamics of the gut microbiome.. Cell Metab. 20(6):1006-17.
Chassaing B, Koren O, Goodrich JK, Poole AC, Srinivasan S, Ley RE, Gewirtz AT.  2015.  Dietary emulsifiers impact the mouse gut microbiota promoting colitis and metabolic syndrome.. Nature. 519(7541):92-6.
Meng Z-X, Wang L, Chang L, Sun J, Bao J, Li Y, Y Chen E, Lin JD.  2015.  A Diet-Sensitive BAF60a-Mediated Pathway Links Hepatic Bile Acid Metabolism to Cholesterol Absorption and Atherosclerosis.. Cell Rep. 13(8):1658-69.
Abu-Soud HM, Maitra D, Shaeib F, Khan SN, Byun J, Abdulhamid I, Yang Z, Saed GM, Diamond MP, Andreana PR et al..  2014.  Disruption of heme-peptide covalent cross-linking in mammalian peroxidases by hypochlorous acid.. J Inorg Biochem. 140:245-54.
Koenigsknecht MJ, Theriot CM, Bergin IL, Schumacher CA, Schloss PD, Young VB.  2015.  Dynamics and establishment of Clostridium difficile infection in the murine gastrointestinal tract.. Infect Immun. 83(3):934-41.
Wang W, Kryczek I, Dostál L, Lin H, Tan L, Zhao L, Lu F, Wei S, Maj T, Peng D et al..  2016.  Effector T Cells Abrogate Stroma-Mediated Chemoresistance in Ovarian Cancer.. Cell. 165(5):1092-105.
Shu L, Vivekanandan-Giri A, Pennathur S, Smid BE, Aerts JMFG, Hollak CEM, Shayman JA.  2014.  Establishing 3-nitrotyrosine as a biomarker for the vasculopathy of Fabry disease.. Kidney Int. 86(1):58-66.
Wernisch S, Pennathur S.  2016.  Evaluation of coverage, retention patterns, and selectivity of seven liquid chromatographic methods for metabolomics.. Anal Bioanal Chem. 408(22):6079-91.
Mell B, Jala VR, Mathew AV, Byun J, Waghulde H, Zhang Y, Haribabu B, Vijay-Kumar M, Pennathur S, Joe B.  2015.  Evidence for a link between gut microbiota and hypertension in the Dahl rat.. Physiol Genomics. 47(6):187-97.
Moore SM, Hess SM, Jorgenson JW.  2016.  Extraction, Enrichment, Solubilization, and Digestion Techniques for Membrane Proteomics.. J Proteome Res. 15(4):1243-52.
O-Sullivan IS, Zhang W, Wasserman DH, Liew CWee, Liu J, Paik J, DePinho RA, Stolz DBeer, C Kahn R, Schwartz MW et al..  2015.  FoxO1 integrates direct and indirect effects of insulin on hepatic glucose production and glucose utilization.. Nat Commun. 6:7079.
Hochberg I, Harvey I, Tran QT, Stephenson EJ, Barkan AL, Saltiel AR, Chandler WF, Bridges D.  2015.  Gene expression changes in subcutaneous adipose tissue due to Cushing's disease.. J Mol Endocrinol. 55(2):81-94.
Hochberg I, Tran QT, Barkan AL, Saltiel AR, Chandler WF, Bridges D.  2015.  Gene Expression Signature in Adipose Tissue of Acromegaly Patients.. PLoS One. 10(6):e0129359.
Kochen MA, Chambers MC, Holman JD, Nesvizhskii AI, Weintraub ST, Belisle JT, M Islam N, Griss J, Tabb DL.  2016.  Greazy: Open-Source Software for Automated Phospholipid Tandem Mass Spectrometry Identification.. Anal Chem. 88(11):5733-41.
Mathewson ND, Jenq R, Mathew AV, Koenigsknecht M, Hanash A, Toubai T, Oravecz-Wilson K, Wu S-R, Sun Y, Rossi C et al..  2016.  Gut microbiome-derived metabolites modulate intestinal epithelial cell damage and mitigate graft-versus-host disease.. Nat Immunol. 17(5):505-13.
Vivekanandan-Giri A, Slocum JL, Byun J, Tang C, Sands RL, Gillespie BW, Heinecke JW, Saran, iv R, Kaplan MJ, Pennathur S.  2013.  High density lipoprotein is targeted for oxidation by myeloperoxidase in rheumatoid arthritis.. Ann Rheum Dis. 72(10):1725-31.
Tripathi P, Somashekar BS, Ponnusamy M, Gursky A, Dailey S, Kunju P, Lee CT, Chinnaiyan AM, Rajendiran TM, Ramamoorthy A.  2013.  HR-MAS NMR tissue metabolomic signatures cross-validated by mass spectrometry distinguish bladder cancer from benign disease.. J Proteome Res. 12(7):3519-28.
Clyman RI, Wickremasinghe A, T Merritt A, Solomon T, McNamara P, Jain A, Singh J, Chu A, Noori S, Sekar K et al..  2014.  Hypotension following patent ductus arteriosus ligation: the role of adrenal hormones.. J Pediatr. 164(6):1449-55.e1.
Overmyer KA, Thonusin C, Qi NR, Burant CF, Evans CR.  2015.  Impact of anesthesia and euthanasia on metabolomics of mammalian tissues: studies in a C57BL/6J mouse model.. PLoS One. 10(2):e0117232.
Veiga-Lopez A, Pennathur S, Kannan K, Patisaul HB, Dolinoy DC, Zeng L, Padmanabhan V.  2015.  Impact of gestational bisphenol A on oxidative stress and free fatty acids: Human association and interspecies animal testing studies.. Endocrinology. 156(3):911-22.
Zhao J, Evans CR, Carmody LA, LiPuma JJ.  2015.  Impact of storage conditions on metabolite profiles of sputum samples from persons with cystic fibrosis.. J Cyst Fibros. 14(4):468-73.
Sondhi V, Owen BM, Liu J, Chomic R, Kliewer SA, Hughes BA, Arlt W, Mangelsdorf DJ, Auchus RJ.  2016.  Impaired 17,20-Lyase Activity in Male Mice Lacking Cytochrome b5 in Leydig Cells.. Mol Endocrinol. 30(4):469-78.
El-Azzouny M, Evans CR, Treutelaar MK, Kennedy RT, Burant CF.  2014.  Increased glucose metabolism and glycerolipid formation by fatty acids and GPR40 receptor signaling underlies the fatty acid potentiation of insulin secretion.. J Biol Chem. 289(19):13575-88.
McDonnell SRP, Hwang SR, Rolland D, Murga-Zamalloa C, Basrur V, Conlon KP, Fermin D, Wolfe T, Raskind A, Ruan C et al..  2013.  Integrated phosphoproteomic and metabolomic profiling reveals NPM-ALK-mediated phosphorylation of PKM2 and metabolic reprogramming in anaplastic large cell lymphoma.. Blood. 122(6):958-68.
Lin F, Ferguson KL, Boyer DR, Lin XNina, E Marsh NG.  2015.  Isofunctional enzymes PAD1 and UbiX catalyze formation of a novel cofactor required by ferulic acid decarboxylase and 4-hydroxy-3-polyprenylbenzoic acid decarboxylase.. ACS Chem Biol. 10(4):1137-44.
Hinder LM, Figueroa-Romero C, Pacut C, Hong Y, Vivekanandan-Giri A, Pennathur S, Feldman EL.  2014.  Long-chain acyl coenzyme A synthetase 1 overexpression in primary cultured Schwann cells prevents long chain fatty acid-induced oxidative stress and mitochondrial dysfunction.. Antioxid Redox Signal. 21(4):588-600.
Pennathur S, Pasichnyk K, Bahrami NM, Zeng L, Febbraio M, Yamaguchi I, Okamura DM.  2015.  The macrophage phagocytic receptor CD36 promotes fibrogenic pathways on removal of apoptotic cells during chronic kidney injury.. Am J Pathol. 185(8):2232-45.
Wooding KM, Auchus RJ.  2013.  Mass spectrometry theory and application to adrenal diseases.. Mol Cell Endocrinol. 371(1-2):201-7.
Overmyer KA, Evans CR, Qi NR, Minogue CE, Carson JJ, Chermside-Scabbo CJ, Koch LG, Britton SL, Pagliarini DJ, Coon JJ et al..  2015.  Maximal oxidative capacity during exercise is associated with skeletal muscle fuel selection and dynamic changes in mitochondrial protein acetylation.. Cell Metab. 21(3):468-78.

Pages